BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A04SP1|AL425211
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1118 1985 0.0
>3x_Contig1118
Length = 5540
Score = 1985 bits (1000), Expect = 0.0
Identities = 1002/1004 (99%)
Strand = Plus / Minus
Query: 1 gatcaatatgatggtgaatttgatattaaaatgcatagaccatccaggacaacggaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5006 gatcaatatgatggtgaatttgatattaaaatgcatagaccatccaggacaacggaaaag 4947
Query: 61 aaatcgaacaaccaacagcaccaatccaatgctgcttctcaacgtggaacgtactcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4946 aaatcgaacaaccaacagcaccaatccaatgctgcttctcaacgtggaacgtactcctcc 4887
Query: 121 gacaaccatattcaatatgaaccaaatgataaccatagtggatatggagatgatgaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4886 gacaaccatattcaatatgaaccaaatgataaccatagtggatatggagatgatgaaatc 4827
Query: 181 gatttggataataacgatatccaatccaattcggatatcagtgatattcacggactgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4826 gatttggataataacgatatccaatccaattcggatatcagtgatattcacggactgaca 4767
Query: 241 tatcacaatcaaaccaattatgatgaacattcgtacgcggacgaagatggtgatgatatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4766 tatcacaatcaaaccaattatgatgaacattcgtacgcggacgaagatggtgatgatatt 4707
Query: 301 gagtcgatgttttactataacggaggtagcatagttcctaacaatgctagagttggaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4706 gagtcgatgttttactataacggaggtagcatagttcctaacaatgctagagttggaagg 4647
Query: 361 aggttctcagaactcgacgatggaacggaagatgtagaatcacaaggatttttctacgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4646 aggttctcagaactcgacgatggaacggaagatgtagaatcacaaggatttttctacgga 4587
Query: 421 gatccgaataatgcagagagatcaaatgaaggaaagggacttggttcgtcccaattacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4586 gatccgaataatgcagagagatcaaatgaaggaaagggacttggttcgtcccaattacct 4527
Query: 481 tatttcaatcaagccagtgagtatactcctttgaagaataaaagagtgagcaggaaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4526 tatttcaatcaagccagtgagtatactcctttgaagaataaaagagtgagcaggaaaaga 4467
Query: 541 tctgatttctacggtgatttttctccccacaacttttacaccaagaagggttcatggtct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4466 tctgatttctacggtgatttttctccccacaacttttacaccaagaagggttcatggtct 4407
Query: 601 aagtttaadaatttcgtttacttctctttcatcgtggcctccctattgactcttggattc 660
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4406 aagtttaaaaatttcgtttacttctctttcatcgtggcctccctattgactcttggattc 4347
Query: 661 atttctggattcctactggcaaccaacaaagaattacacgatttccaattgttggccatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4346 atttctggattcctactggcaaccaacaaagaattacacgatttccaattgttggccatg 4287
Query: 721 gataacgttctagtttcgttggatgaattagtattcgatatcacagcgactgcgtttaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4286 gataacgttctagtttcgttggatgaattagtattcgatatcacagcgactgcgtttaat 4227
Query: 781 ccaagtctcttcactattggtataaaagacgtggaactagatatatttgctaagactaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4226 ccaagtctcttcactattggtataaaagacgtggaactagatatatttgctaagactaag 4167
Query: 841 cacgttgacgttagttcaaatgaagacaagttatattcaactccataccaaaccatacta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4166 cacgttgacgttagttcaaatgaagacaagttatattcaactccataccaaaccatacta 4107
Query: 901 ctcgggacagtatacaatctcgaaagtgaactacaatttagaggaagattgatcaacaga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4106 ctcgggacagtatacaatctcgaaagtgaactacaatttagaggaagattgatcaacaga 4047
Query: 961 aatwatgatgtttctgttgccagtgttaaattgctcaatcctgg 1004
||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4046 aattatgatgtttctgttgccagtgttaaattgctcaatcctgg 4003
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7848
Number of Sequences: 1807
Number of extensions: 7848
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)